STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JMJD1CJumonji domain containing 1C. (2336 aa)    
Predicted Functional Partners:
CCNC
Cyclin C; Belongs to the cyclin family.
      
 0.632
STOX1
Storkhead box 1.
      
 0.631
RB1CC1
RB1 inducible coiled-coil 1.
   
  
 0.548
TEX10
Testis expressed 10.
      
 0.539
TMEM68
Uncharacterized protein.
      
 0.524
RIC8B
RIC8 guanine nucleotide exchange factor B.
      
 0.477
LIN28B
Lin-28 homolog B.
      
 0.451
U3I833_ANAPP
Histone H3; Belongs to the histone H3 family.
    
 0.449
ENSAPLP00000026892
annotation not available
    
 0.449
ENSAPLP00000030836
Histone domain-containing protein.
    
 0.449
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.