STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPLP00000023562Protein kinase domain-containing protein. (98 aa)    
Predicted Functional Partners:
TRIO
Trio Rho guanine nucleotide exchange factor.
 
  
   0.901
CDC42
Cell division cycle 42.
   
 0.642
ENSAPLP00000028946
Uncharacterized protein.
  
 0.630
RHOF
Ras homolog family member F, filopodia associated.
   
 0.629
RHOG-2
Uncharacterized protein.
   
 0.628
RND1
Rho family GTPase 1.
   
 0.628
RND3
Rho family GTPase 3.
   
 0.628
RHOG
Ras homolog family member G.
   
 0.628
RHOH
Ras homolog family member H.
   
 0.625
RAC1
Rac family small GTPase 1.
   
 0.625
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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