STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPLP00000023699Uncharacterized protein. (50 aa)    
Predicted Functional Partners:
KATNBL1
Katanin regulatory subunit B1 like 1.
      
 0.887
TIMM9
zf-Tim10_DDP domain-containing protein.
   
  
 0.821
ISCA2
Iron-sulfur cluster assembly 2.
   
  
 0.753
ZZEF1
Zinc finger ZZ-type and EF-hand domain containing 1.
      
 0.747
ATP5PF
ATP synthase-coupling factor 6, mitochondrial; Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain; Belongs to the eukaryotic ATPase subunit F6 family.
   
  
 0.745
DNAJC19
DnaJ heat shock protein family (Hsp40) member C19.
   
 
 0.662
ATP5MF
ATP synthase membrane subunit f.
   
  
 0.647
CISD1
CDGSH iron sulfur domain 1.
   
  
 0.643
TIMM13
Translocase of inner mitochondrial membrane 13; Belongs to the small Tim family.
      
 0.633
TIMM21
Uncharacterized protein.
      
 0.627
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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