STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPLP00000023714Gastrin domain-containing protein. (105 aa)    
Predicted Functional Partners:
NTS
Neurotensin.
     
 0.708
U3IC45_ANAPP
Motilin_ghrelin domain-containing protein.
     
 0.659
VIP
Vasoactive intestinal peptide.
   
  
 0.643
ENSAPLP00000020004
GLUCAGON domain-containing protein.
      
 0.622
CCK
Cholecystokinin.
      
 0.611
ENSAPLP00000018664
Uncharacterized protein.
      
 0.600
GHRL
Ghrelin and obestatin prepropeptide.
     
 0.597
GRP
Uncharacterized protein.
   
 
 0.584
KALRN
Kalirin RhoGEF kinase.
   
 
  0.532
TRIO
Trio Rho guanine nucleotide exchange factor.
   
 
  0.532
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.