STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDFY3WD repeat and FYVE domain containing 3. (3542 aa)    
Predicted Functional Partners:
ATG5
Autophagy protein 5; Involved in autophagic vesicle formation.
    
 0.743
GABARAPL1
GABA type A receptor associated protein like 1.
   
 
 0.736
SQSTM1
Uncharacterized protein.
   
 
 0.732
ATG16L1
WD_REPEATS_REGION domain-containing protein.
    
 0.675
DRAM1
DNA damage regulated autophagy modulator 1.
      
 0.659
GABARAPL2
GABA type A receptor associated protein like 2.
   
 
 0.656
EPS15L1
Epidermal growth factor receptor pathway substrate 15 like 1.
    
 
 0.626
SOGA1
DUF4482 domain-containing protein.
      
 0.625
POGZ
Pogo transposable element derived with ZNF domain.
      
 0.609
MAP1LC3A
Microtubule associated protein 1 light chain 3 alpha.
    
 
 0.600
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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