STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABCA13ATP binding cassette subfamily A member 13. (3664 aa)    
Predicted Functional Partners:
COG1
Component of oligomeric golgi complex 1.
      
 0.621
U3I8N2_ANAPP
Uncharacterized protein.
      
 0.586
BTF3L4
Transcription factor BTF3; Belongs to the NAC-beta family.
      
 0.586
NR1H4
Nuclear receptor subfamily 1 group H member 4.
    
 0.521
MAF1
MAF1 homolog, negative regulator of RNA polymerase III.
   
  
 0.492
TMOD2
Tropomodulin 2.
      
 0.480
TMOD3
Tropomodulin 3.
      
 0.477
MDM4
Protein Mdm4; Inhibits p53- and p73-mediated cell cycle arrest and apoptosis by binding its transcriptional activation domain. Belongs to the MDM2/MDM4 family.
   
 
 0.470
MAIP1
Matrix AAA peptidase interacting protein 1.
      
 0.428
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.