STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACOT8Uncharacterized protein. (203 aa)    
Predicted Functional Partners:
SCP2
Sterol carrier protein 2; Belongs to the thiolase-like superfamily. Thiolase family.
   
 
 0.948
ENSAPLP00000017305
BAAT_C domain-containing protein.
     
 0.919
ACAD8
Acyl-CoA dehydrogenase family member 8.
  
 
 0.686
ENSAPLP00000032341
Uncharacterized protein.
     
 0.663
ACOT12
Acyl-CoA thioesterase 12.
      
 0.611
ACOT11
Acyl-CoA thioesterase 11.
      
 0.611
LSM6
LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated.
      
 0.586
FITM2
Fat storage inducing transmembrane protein 2.
      
 0.586
PEX10
Peroxisomal biogenesis factor 10.
     
 0.573
PEX13
Peroxisomal biogenesis factor 13.
   
 
 0.572
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.