STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RASSF3Ras association domain family member 3. (352 aa)    
Predicted Functional Partners:
TRUB2
TruB pseudouridine synthase family member 2.
      
 0.625
EEF1AKMT1
EEF1A lysine methyltransferase 1; Protein-lysine methyltransferase that selectively catalyzes the trimethylation of EEF1A at 'Lys-79'; Belongs to the class I-like SAM-binding methyltransferase superfamily. EFM5 family.
      
 0.611
NOC3L
Nucleolar complex protein 3 homolog.
      
 0.611
C2orf49
Chromosome 2 open reading frame 49.
      
 0.611
CDK11A
Protein kinase domain-containing protein.
      
 0.602
PHYHIPL
Phytanoyl-CoA 2-hydroxylase interacting protein like.
      
 0.600
ENSAPLP00000017946
AB hydrolase-1 domain-containing protein.
      
 0.594
ENSAPLP00000018941
Abhydro_lipase domain-containing protein.
      
 0.594
TERF2IP
TERF2 interacting protein.
      
 0.586
FCHSD2
FCH and double SH3 domains 2.
      
 0.586
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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