STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPLP00000024432Uncharacterized protein. (144 aa)    
Predicted Functional Partners:
TYW3
tRNA-yW synthesizing protein 3 homolog.
  
 
 0.673
U3IWF3_ANAPP
Flavodoxin-like domain-containing protein.
   
 
 0.653
U3IRC4_ANAPP
Uncharacterized protein.
   
  
 0.646
EHD3
EH domain containing 3; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
      
 0.618
PGBD5
PiggyBac transposable element derived 5.
      
 0.611
TSR3
Probable ribosome biogenesis protein TSR3; Probable pre-rRNA processing protein involved in ribosome biogenesis.
   
  
 0.588
TRMT5
tRNA (guanine(37)-N1)-methyltransferase; Specifically methylates the N1 position of guanosine-37 in various cytoplasmic and mitochondrial tRNAs. Methylation is not dependent on the nature of the nucleoside 5' of the target nucleoside. This is the first step in the biosynthesis of wybutosine (yW), a modified base adjacent to the anticodon of tRNAs and required for accurate decoding; Belongs to the TRM5 / TYW2 family.
      
 0.586
SLC25A28
Solute carrier family 25 member 28; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.555
BUD23
BUD23 rRNA methyltransferase and ribosome maturation factor.
   
  
 0.504
LCMT1
Leucine carboxyl methyltransferase 1.
   
  
 0.501
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.