STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TOM1L2Target of myb1 like 2 membrane trafficking protein; Belongs to the TOM1 family. (532 aa)    
Predicted Functional Partners:
MYO6
Myosin VI; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 
 0.710
TOLLIP
Toll interacting protein.
    
 
 0.671
VPS50
VPS50 subunit of EARP/GARPII complex.
      
 0.623
FNIP2
Folliculin interacting protein 2.
      
 0.611
RALGPS1
Ral GEF with PH domain and SH3 binding motif 1.
      
 0.611
PHLDB2
Pleckstrin homology like domain family B member 2.
      
 0.611
TSPAN5
Tetraspanin.
      
 0.609
RABGEF1
Uncharacterized protein.
     
 0.592
RALGPS2
Ral GEF with PH domain and SH3 binding motif 2.
      
 0.586
LDLRAP1
Low density lipoprotein receptor adaptor protein 1.
      
 0.586
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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