STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COL8A2Collagen type VIII alpha 2 chain. (724 aa)    
Predicted Functional Partners:
COL8A1
Collagen type VIII alpha 1 chain.
  
 
0.920
COL27A1
LAM_G_DOMAIN domain-containing protein.
 
   
 0.815
COL6A2
Uncharacterized protein.
 
 
  0.719
U3IAT1_ANAPP
Fibrillar collagen NC1 domain-containing protein.
 
  
  0.693
KANK4
KN motif and ankyrin repeat domains 4.
    
 0.634
SLC4A11
Solute carrier family 4 member 11.
      
 0.633
CYYR1
Cysteine and tyrosine rich 1.
      
 0.622
COL21A1
VWFA domain-containing protein.
 
   
 0.607
ENSAPLP00000030675
VWFA domain-containing protein.
 
  
  0.587
AGBL1
ATP/GTP binding protein like 1.
      
 0.551
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.