STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHMP4CCharged multivesicular body protein 4C. (221 aa)    
Predicted Functional Partners:
CHMP5
Charged multivesicular body protein 5.
  
0.993
CHMP2B
Charged multivesicular body protein 2B.
    
 0.980
PDCD6IP
BRO1 domain-containing protein.
   
 0.972
CHMP1A
Charged multivesicular body protein 1A.
    
 0.971
U3HZV8_ANAPP
Uncharacterized protein.
   
 0.965
ENSAPLP00000017876
Uncharacterized protein.
   
 0.963
IST1
IST1 factor associated with ESCRT-III.
    
 0.893
ENSAPLP00000017447
Uncharacterized protein.
   
 0.887
SNF8
SNF8 subunit of ESCRT-II.
    
 0.882
VPS4B
Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family.
    
 0.864
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.