STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCBTB1RCC1 and BTB domain containing protein 1. (713 aa)    
Predicted Functional Partners:
ACTR8
Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily.
    
 0.650
PHF11
PHD finger protein 11.
     
 0.637
STARD3NL
STARD3 N-terminal like.
      
 0.635
AMDHD2
Uncharacterized protein.
      
 0.634
NSA2
NSA2 ribosome biogenesis factor.
   
  
 0.623
ENSAPLP00000023973
Uncharacterized protein.
      
 0.622
NUBPL
Nucleotide binding protein like.
      
 0.611
CARHSP1
Calcium regulated heat stable protein 1.
      
 0.586
SETDB2
SET domain bifurcated histone lysine methyltransferase 2.
     
 0.572
ZFAND4
Zinc finger AN1-type containing 4.
    
 0.569
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.