STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPLP00000024698Uncharacterized protein. (68 aa)    
Predicted Functional Partners:
ELL
Elongation factor for RNA polymerase II.
    
 0.755
USPL1
Ubiquitin specific peptidase like 1.
   
 
 0.628
ZC3H6
Zinc finger CCCH-type containing 6.
     
 0.599
ZC3H6-2
Uncharacterized protein.
     
 0.599
RPAP2
RNA polymerase II associated protein 2.
   
 
 0.556
ENSAPLP00000024913
Uncharacterized protein.
    
 0.542
ELL2
Elongation factor for RNA polymerase II 2.
    
 0.542
ICE1
Uncharacterized protein.
    
  0.493
ENSAPLP00000021409
Uncharacterized protein.
     
 0.477
PRPF6
Pre-mRNA processing factor 6.
      
 0.459
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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