STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPLP00000024705EHD_N domain-containing protein. (621 aa)    
Predicted Functional Partners:
RBSN
Rabenosyn, RAB effector.
    
 0.755
ENSAPLP00000023137
Uncharacterized protein.
  
  
 0.647
CASQ2
Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.
   
 0.644
SYNC
Syncoilin, intermediate filament protein.
   
 0.630
SYPL2
Synaptophysin like 2.
   
  
 0.620
RNH1
Ribonuclease/angiogenin inhibitor 1.
      
 0.609
ENSAPLP00000032387
Uncharacterized protein.
      
 0.609
JPH1
Junctophilin 1.
   
  
 0.608
MYL1
Myosin light chain 1.
   
  
 0.573
HSPB3
Heat shock protein family B (small) member 3; Belongs to the small heat shock protein (HSP20) family.
   
   0.561
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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