STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPLP00000024708IF rod domain-containing protein; Belongs to the intermediate filament family. (656 aa)    
Predicted Functional Partners:
BANF1
Barrier to autointegration factor 1.
   
 0.550
CMYA5
Cardiomyopathy associated 5.
  
 
  0.462
CX3CL1
SCY domain-containing protein.
  
 
 
 0.451
ENSAPLP00000030281
Uncharacterized protein.
  
   0.429
MAVS
CARD_2 domain-containing protein.
  
 
   0.422
TCAP
Titin-cap.
   
 
 0.415
ZNF831
Zinc finger protein 831.
  
 
   0.411
U3J6D9_ANAPP
Uncharacterized protein; Belongs to the peptidase C14A family.
  
 
 0.409
AKAP12
A-kinase anchoring protein 12.
  
  
  0.401
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.