STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPLP00000024730Uncharacterized protein. (65 aa)    
Predicted Functional Partners:
ENSAPLP00000028245
Uncharacterized protein.
    
 
 0.846
TNPO1
Transportin 1.
   
 
 0.766
KPNB1
Karyopherin subunit beta 1.
   
 
 0.746
ASF1A
Anti-silencing function 1A histone chaperone.
   
 
 0.629
GMPS
Guanine monophosphate synthase.
   
    0.605
POLR1A
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
    0.582
POLDIP3
DNA polymerase delta interacting protein 3.
   
   0.540
ENSAPLP00000029053
RRM domain-containing protein.
   
   0.540
IPO7
Importin 7.
   
 
 0.524
IPO8
Importin 8.
   
 
 0.524
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.