STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OTX2Orthodenticle homeobox 2. (289 aa)    
Predicted Functional Partners:
SIX3
SIX homeobox 3.
   
 
 0.781
SHH
Sonic hedgehog signaling molecule.
      
 0.774
FGF8
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
    
 
 0.750
PAX2
Paired box 2.
   
  
 0.748
LMX1A
Uncharacterized protein.
    
 
 0.726
FOXA2
Forkhead box A2.
   
 
 0.723
BMP4
Bone morphogenetic protein 4.
      
 0.669
ISL1
ISL LIM homeobox 1.
   
 
 0.651
WNT1
Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.
      
 0.643
SOX1
SRY-box transcription factor 1.
   
 
 0.641
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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