STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPLP00000024807COE1_DBD domain-containing protein. (226 aa)    
Predicted Functional Partners:
EBF1
EBF transcription factor 1.
 
     0.939
EBF3
IPT/TIG domain-containing protein.
 
     0.937
EBF4
EBF family member 4.
 
     0.763
PAX5
Paired box 5.
   
  
 0.589
GBX2
Gastrulation brain homeobox 2.
    
 
 0.558
TCF7L2
Transcription factor 7 like 2.
      
 0.550
ENSAPLP00000031782
COE1_DBD domain-containing protein.
 
     0.505
UFD1
Ubiquitin recognition factor in ER associated degradation 1.
    
 
 0.487
CPXM1
Carboxypeptidase X, M14 family member 1.
      
 0.478
YOD1
YOD1 deubiquitinase.
    
   0.469
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.