STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPLP00000024837Uncharacterized protein. (237 aa)    
Predicted Functional Partners:
ENSAPLP00000028891
RRM domain-containing protein.
 
      0.899
UBE2I
Ubiquitin conjugating enzyme E2 I; Belongs to the ubiquitin-conjugating enzyme family.
    
   0.686
HNRNPK
Heterogeneous nuclear ribonucleoprotein K.
   
 0.678
U3J272_ANAPP
RRM domain-containing protein.
   
 0.637
HNRNPA2B1
Heterogeneous nuclear ribonucleoprotein A2/B1.
   
 0.623
PTBP1
Polypyrimidine tract binding protein 1.
   
 0.617
PTBP3
Polypyrimidine tract binding protein 3.
   
 0.614
PTBP2
Polypyrimidine tract binding protein 2.
   
 0.612
SUGP2
SURP and G-patch domain containing 2.
    
 
 0.610
SRSF4
Serine and arginine rich splicing factor 4.
   
 0.607
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.