STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMIGD1Uncharacterized protein. (318 aa)    
Predicted Functional Partners:
SLC10A2
Solute carrier family 10 member 2.
   
  
 0.682
CLRN3
Clarin 3.
   
  
 0.668
SLC6A19
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
   
  
 0.651
SLC5A1
Solute carrier family 5 member 1; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
   
  
 0.610
CELF5
CUGBP Elav-like family member 5.
      
 0.609
MTURN
Maturin, neural progenitor differentiation regulator homolog.
      
 0.609
LRFN5
Leucine rich repeat and fibronectin type III domain containing 5.
      
 0.595
CRTAC1
Cartilage acidic protein 1.
      
 0.593
ENSAPLP00000026725
Uncharacterized protein.
   
  
 0.456
MMRN2
Multimerin 2.
      
 0.439
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.