STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPLP00000024910DUF908 domain-containing protein. (282 aa)    
Predicted Functional Partners:
SMURF2
SMAD specific E3 ubiquitin protein ligase 2.
 
  
 0.907
ITCH
E3 ubiquitin-protein ligase.
 
 
 0.907
ENSAPLP00000032550
Uncharacterized protein.
 
 
 0.907
SMURF1
E3 ubiquitin-protein ligase.
 
  
 0.905
WWP1
E3 ubiquitin-protein ligase.
 
 
 0.896
MCL1
MCL1 apoptosis regulator, BCL2 family member.
    
 
 0.893
ENSAPLP00000025536
Ubiquitin-like domain-containing protein.
    
 0.864
ENSAPLP00000023897
Uncharacterized protein.
   
 0.863
RPS27A
Ubiquitin-like domain-containing protein.
   
 0.807
ZBTB17
Zinc finger and BTB domain containing 17.
    
 0.780
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.