STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBXN4Uncharacterized protein. (72 aa)    
Predicted Functional Partners:
VCP
Valosin containing protein; Belongs to the AAA ATPase family.
    
 0.987
NSFL1C
NSFL1 cofactor.
    
 0.926
UBXN2A
UBX domain protein 2A.
    
 0.922
TIMM21
Uncharacterized protein.
      
 0.652
NDUFB10
NADH:ubiquinone oxidoreductase subunit B10.
      
 0.632
YRDC
YrdC N6-threonylcarbamoyltransferase domain containing.
      
 0.622
U3IPR8_ANAPP
Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family.
      
 0.621
TCEA3
Transcription elongation factor A3.
      
 0.616
SPATA5L1
Spermatogenesis associated 5 like 1.
    
 
 0.584
SPATA5
Spermatogenesis associated 5.
    
 
 0.584
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.