STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNX16Sorting nexin 16. (346 aa)    
Predicted Functional Partners:
SNX33
SH3 domain-containing protein.
      
 0.707
ENSAPLP00000021373
Uncharacterized protein.
    
 
 0.696
VPS26A
VPS26, retromer complex component A.
   
 
 0.629
ZBTB44
Zinc finger and BTB domain containing 44.
      
 0.611
ZBTB41
Zinc finger and BTB domain containing 41.
      
 0.611
SNX6
Sorting nexin; Involved in several stages of intracellular trafficking.
      
 0.611
SNX18
Sorting nexin.
      
 0.610
BRWD1
Uncharacterized protein.
      
 0.594
ENSAPLP00000021917
Uncharacterized protein.
      
 0.594
HELZ
Helicase with zinc finger.
      
 0.586
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.