STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPLP00000025095Reticulon domain-containing protein. (126 aa)    
Predicted Functional Partners:
SEC63
SEC63 homolog, protein translocation regulator.
    
 
 0.628
VTA1
Vesicle trafficking 1.
    
   0.572
GCH1
GTP cyclohydrolase 1.
    
   0.572
ENSAPLP00000024412
Death domain-containing protein.
     
 0.504
OMG
Oligodendrocyte myelin glycoprotein.
    
 0.495
REEP5
Receptor expression-enhancing protein.
    
 
 0.490
REEP6
Receptor expression-enhancing protein.
    
 
 0.472
LINGO1
Leucine rich repeat and Ig domain containing 1.
   
 0.465
TMEM33
Transmembrane protein 33.
    
 
 0.439
LRFN5
Leucine rich repeat and fibronectin type III domain containing 5.
    
 0.427
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.