STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAASAladin WD repeat nucleoporin. (700 aa)    
Predicted Functional Partners:
NUP155
Nucleoporin 155.
   
 0.990
NUP88
Nucleoporin 88.
    
 0.987
NUP205
Nucleoporin 205.
   
 0.985
NUP214
Nucleoporin 214.
    
 0.985
SEH1L
SEH1 like nucleoporin; Belongs to the WD repeat SEC13 family.
    
 0.984
NUP93
Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family.
   
 0.983
NDC1
NDC1 transmembrane nucleoporin.
   
 0.982
NUP188
Uncharacterized protein.
   
 0.980
NUP98
Nucleoporin 98.
    
 0.977
TPR
Translocated promoter region, nuclear basket protein.
     
 0.976
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.