STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPLP00000025388BRO1 domain-containing protein. (85 aa)    
Predicted Functional Partners:
SDCBP
Syndecan binding protein.
    
 0.754
CHMP4C
Charged multivesicular body protein 4C.
   
 0.739
CHMP4B
Charged multivesicular body protein 4B.
   
 0.736
CEP55
Centrosomal protein 55.
    
 
 0.688
ENSAPLP00000023897
Uncharacterized protein.
   
 
 0.656
VPS4B
Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family.
   
 0.635
ENSAPLP00000029894
Uncharacterized protein; Belongs to the AAA ATPase family.
   
 0.635
SDCBP2
Syndecan binding protein 2.
    
 0.624
PEF1
Penta-EF-hand domain containing 1.
    
 
 0.596
PDCD6
Programmed cell death 6.
    
 
 0.596
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.