STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAP1Small ArfGAP 1. (496 aa)    
Predicted Functional Partners:
TBCD
Tubulin folding cofactor D.
      
 0.627
RBP2
Retinol binding protein 2; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.
      
 0.625
PTPRF
Protein tyrosine phosphatase receptor type F.
   
  
 0.612
CLSTN1
Calsyntenin 1.
      
 0.611
DENND5B
DENN domain containing 5B.
      
 0.610
EIF5
Eukaryotic translation initiation factor 5.
      
 0.610
RPL7
Ribosomal protein L7.
      
 0.587
EIF4G1
Eukaryotic translation initiation factor 4 gamma 1.
      
 0.563
ENSAPLP00000023310
Uncharacterized protein.
      
 0.563
VPS33B
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
      
 0.487
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.