STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
USP24Ubiquitin specific peptidase 24; Belongs to the peptidase C19 family. (2622 aa)    
Predicted Functional Partners:
DDB2
Damage specific DNA binding protein 2.
    
 0.965
ZFAND4
Zinc finger AN1-type containing 4.
    
  0.865
TRIP12
Thyroid hormone receptor interactor 12.
   
 
 0.701
WDR76
WD repeat-containing protein 76; Specifically binds 5-hydroxymethylcytosine (5hmC), suggesting that it acts as a specific reader of 5hmC. Belongs to the WD repeat DDB2/WDR76 family.
    
 0.656
SMAD4
Mothers against decapentaplegic homolog.
   
  0.630
ENSAPLP00000020757
Uncharacterized protein.
   
 
  0.605
ENSAPLP00000024521
EH domain-containing protein.
   
 
  0.605
ENSAPLP00000028453
annotation not available
   
 
  0.605
ENSAPLP00000028515
Uncharacterized protein.
   
 
  0.605
ITSN2
Uncharacterized protein.
   
 
  0.605
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.