STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GGA1Golgi associated, gamma adaptin ear containing, ARF binding protein 1. (664 aa)    
Predicted Functional Partners:
RABGEF1
Uncharacterized protein.
    
 0.933
ENSAPLP00000028418
Uncharacterized protein.
    
 
 0.829
ENSAPLP00000029550
Uncharacterized protein.
    
 
 0.829
RABEP1
Rabaptin, RAB GTPase binding effector protein 1.
    
 0.806
IGF2R
Insulin like growth factor 2 receptor.
    
 
 0.766
CCN3
Cellular communication network factor 3.
      
 0.749
SPRYD7
SPRY domain containing 7.
      
 0.670
PAK4
P21 (RAC1) activated kinase 4.
      
 0.631
CCDC91
Coiled-coil domain containing 91.
    
 
 0.623
GTF2F2
General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity.
      
 0.602
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
Server load: low (28%) [HD]