STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MSX1Msh homeobox 1. (299 aa)    
Predicted Functional Partners:
ZIC1
Zic family member 1.
    
 0.778
PAX9
Paired box 9.
    
 
 0.775
BMP4
Bone morphogenetic protein 4.
      
 0.767
FGF8
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
      
 0.764
SHH
Sonic hedgehog signaling molecule.
   
  
 0.745
SOX9
SRY-box transcription factor 9.
      
 0.720
SOX10
SRY-box transcription factor 10.
      
 0.711
LEF1
Uncharacterized protein.
   
  
 0.699
FGF10
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
   
  
 0.685
BARX1
BARX homeobox 1.
   
  
0.677
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.