STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BTBD8BTB domain containing 8. (1810 aa)    
Predicted Functional Partners:
GMPR
GMP reductase; Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides.
    
 0.656
EPHX4
Epoxide hydrolase 4.
 
      0.636
KIF25
Kinesin family member 25; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
      
 0.602
PALB2
Partner and localizer of BRCA2.
  
 0.580
AASDH
Aminoadipate-semialdehyde dehydrogenase.
    
 0.502
TRAPPC6B
Trafficking protein particle complex 6B.
      
 0.482
SETD5
SET domain containing 5.
      
 0.476
LRRC40
Leucine rich repeat containing 40.
    
 
 0.443
PPARGC1A
PPARG coactivator 1 alpha.
   
  
 0.438
PECR
Peroxisomal trans-2-enoyl-CoA reductase.
  
 0.436
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.