STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NFIANuclear factor 1; Recognizes and binds the palindromic sequence 5'- TTGGCNNNNNGCCAA-3' present in viral and cellular promoters and in the origin of replication of adenovirus type 2. These proteins are individually capable of activating transcription and replication. (574 aa)    
Predicted Functional Partners:
HOOK1
Hook microtubule tethering protein 1.
      
 0.681
SOX9
SRY-box transcription factor 9.
    
 
 0.678
NF1
Neurofibromin 1.
      
 0.488
SNRK
SNF related kinase.
      
 0.450
SIK2
Salt inducible kinase 2.
      
 0.450
SRP14
Signal recognition particle 14.
      
 0.450
U3IS84_ANAPP
IF rod domain-containing protein; Belongs to the intermediate filament family.
    
 
 0.442
GFAP
IF rod domain-containing protein; Belongs to the intermediate filament family.
    
 
 0.442
OLIG2
Oligodendrocyte transcription factor 2.
      
 0.434
OLIG3
Oligodendrocyte transcription factor 3.
      
 0.434
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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