STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MUL1Mitochondrial E3 ubiquitin protein ligase 1. (175 aa)    
Predicted Functional Partners:
UBXN7
UBX domain-containing protein 7.
    
  0.866
USP30
Ubiquitin carboxyl-terminal hydrolase.
     
 0.688
NAA35
N(alpha)-acetyltransferase 35, NatC auxiliary subunit.
      
 0.611
UBE2D2
Ubiquitin conjugating enzyme E2 D2; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.595
UBE2D3
Ubiquitin conjugating enzyme E2 D3; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.595
TMEM11
Transmembrane protein 11.
   
  
 0.588
SAMM50
SAMM50 sorting and assembly machinery component.
      
 0.555
NR6A1
Nuclear receptor subfamily 6 group A member 1.
    
 
 0.547
SYT16
Synaptotagmin 16.
      
 0.545
UBE2D1
Ubiquitin conjugating enzyme E2 D1.
    
 
 0.539
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.