STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSGEPO-sialoglycoprotein endopeptidase. (171 aa)    
Predicted Functional Partners:
TP53RK
TP53 regulating kinase.
  
 0.994
TPRKB
TP53RK binding protein; Belongs to the CGI121/TPRKB family.
    
 0.993
PIP4P2
Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P).
 
    
 0.826
U3J1M6_ANAPP
YrdC-like domain-containing protein.
  
 
 0.775
YRDC
YrdC N6-threonylcarbamoyltransferase domain containing.
  
 
 0.775
ACP1
Acid phosphatase 1.
    
 0.742
GLT8D1
Glycosyltransferase 8 domain containing 1.
      
 0.716
PSMB1
Proteasome subunit beta.
 
    
 0.671
SUPT7L
SPT7 like, STAGA complex gamma subunit.
   
  
 0.653
EPRS1
Glutamyl-prolyl-tRNA synthetase.
  
 
 0.626
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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