STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPM1HProtein phosphatase, Mg2+/Mn2+ dependent 1H. (517 aa)    
Predicted Functional Partners:
RILPL1
Rab interacting lysosomal protein like 1.
      
 0.749
RAB29
RAB29, member RAS oncogene family.
    
 
 0.634
SRGAP1
SLIT-ROBO Rho GTPase activating protein 1.
      
 0.545
SLC22A3
Solute carrier family 22 member 3.
      
 0.539
RILPL2
Rab interacting lysosomal protein like 2.
      
 0.495
ACBD3
Acyl-CoA binding domain containing 3.
    
 
 0.470
RAB35
RAB35, member RAS oncogene family.
    
 
 0.468
RILP
RH1 domain-containing protein.
      
 0.438
TSHZ1
Teashirt zinc finger homeobox 1.
      
 0.430
ENSAPLP00000029457
PPM-type phosphatase domain-containing protein.
      
 0.410
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.