STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM118AFamily with sequence similarity 118 member A. (442 aa)    
Predicted Functional Partners:
DNAJC18
DUF1977 domain-containing protein.
    
 0.562
REEP6
Receptor expression-enhancing protein.
    
 
 0.502
PLD6
Phospholipase D family member 6.
   
 
 0.495
TTC38
Tetratricopeptide repeat domain 38.
      
 0.491
LETM1
Leucine zipper and EF-hand containing transmembrane protein 1.
    
 
 0.481
TRMU
tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase.
     
 0.453
GAK
Cyclin G associated kinase.
    
 0.439
TMEM39B
Transmembrane protein 39B.
      
 0.434
TMEM39A
Transmembrane protein 39A.
      
 0.434
BBS9
PHTB1_N domain-containing protein.
    
 0.429
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.