STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFCAB5EF-hand calcium binding domain 5. (1262 aa)    
Predicted Functional Partners:
NSRP1
Nuclear speckle splicing regulatory protein 1.
 
    
 0.797
RIPOR3
RIPOR family member 3.
    
 0.619
TRAPPC13
Trafficking protein particle complex 13.
      
 0.609
DPH6
Diphthami_syn_2 domain-containing protein.
      
 0.602
WSCD1
WSC domain containing 1.
     
 0.557
AP3S2
Adaptor related protein complex 3 subunit sigma 2.
      
 0.551
SLC37A1
Solute carrier family 37 member 1.
      
 0.551
B3GALT1
Hexosyltransferase.
     
 0.545
TMEM72
Transmembrane protein 72.
      
 0.532
DEXI
Dexi homolog.
      
 0.532
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.