STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMIEUncharacterized protein. (238 aa)    
Predicted Functional Partners:
CIB2
Uncharacterized protein.
     
 0.688
TMC2
Uncharacterized protein.
     
 0.536
TMC3
Transmembrane channel-like protein.
     
 0.475
ENSAPLP00000020316
Uncharacterized protein.
     
 0.475
LHFPL3
LHFPL tetraspan subfamily member 3.
     
 0.461
LHFPL5
LHFPL tetraspan subfamily member 5.
     
 0.461
LHFPL4
LHFPL tetraspan subfamily member 4.
     
 0.461
CIB3
Calcium and integrin binding family member 3.
     
 0.444
CIB1
Calcium and integrin binding 1.
     
 0.444
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.