STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LETM1Leucine zipper and EF-hand containing transmembrane protein 1. (741 aa)    
Predicted Functional Partners:
NELFA
Negative elongation factor complex member A.
    
 
 0.698
MICU2
Mitochondrial calcium uptake 2.
      
 0.623
NSD2
Nuclear receptor binding SET domain protein 2.
      
 0.618
MICU1
Mitochondrial calcium uptake 1.
      
 0.612
MCU
Mitochondrial calcium uniporter.
      
 0.611
RPS2
Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
    
 
 0.608
MRPL22
Mitochondrial ribosomal protein L22; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.598
MRPL13
Mitochondrial ribosomal protein L13.
   
   0.595
ENSAPLP00000022443
Ribosomal_S4 domain-containing protein.
    
 
 0.592
DNASE2B
Deoxyribonuclease 2 beta.
 
      0.591
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.