STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VRK1VRK serine/threonine kinase 1; Belongs to the protein kinase superfamily. (445 aa)    
Predicted Functional Partners:
BANF1
Barrier to autointegration factor 1.
    
 0.818
LTV1
Uncharacterized protein.
    
 0.754
ANKLE2
Ankyrin repeat and LEM domain containing 2.
   
 0.746
LAMTOR3
Uncharacterized protein.
    
 0.685
CEP170B
Centrosomal protein 170B.
     
 0.663
INTS9
Integrator complex subunit 9.
      
 0.655
BYSL
Bystin like.
    
 0.649
RAB39A
RAB39A, member RAS oncogene family.
    
 0.646
CWF19L2
CWF19 like cell cycle control factor 2.
      
 0.642
DAPP1
Dual adaptor of phosphotyrosine and 3-phosphoinositides 1.
    
 
 0.636
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.