STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LIN7CProtein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family. (197 aa)    
Predicted Functional Partners:
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
    
 0.980
MPP1
Membrane palmitoylated protein 1; Belongs to the MAGUK family.
    
 0.781
MPP6
Membrane palmitoylated protein 6; Belongs to the MAGUK family.
    
 0.703
MPP2
Membrane palmitoylated protein 2.
    
 0.703
MPP7
Membrane palmitoylated protein 7; Belongs to the MAGUK family.
    
0.652
APBA1
Amyloid beta precursor protein binding family A member 1.
    
 0.621
ENSAPLP00000021789
Protein kinase domain-containing protein.
    
 0.593
ENSAPLP00000025909
Uncharacterized protein.
    
 0.593
CAMK2D
Protein kinase domain-containing protein.
    
 0.593
APBA2
Amyloid beta precursor protein binding family A member 2.
    
 0.570
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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