STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PLA2G6Phospholipase A2 group VI. (811 aa)    
Predicted Functional Partners:
FBXO7
F-box protein 7.
      
 0.847
ATP13A2
Cation-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily.
      
 0.777
C19orf12
Chromosome 19 open reading frame 12.
    
 
 0.755
RNF19B
Ring finger protein 19B.
   
  
 0.744
PLA2G4A
Phospholipase A2.
     
 0.738
VPS35
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 
 0.696
PARK7
Parkinsonism associated deglycase.
     
 0.680
PLA2G15
Phospholipase A2 group XV.
      
 0.624
DNAJC6
DnaJ heat shock protein family (Hsp40) member C6.
   
  
 0.624
VPS13C
Vacuolar protein sorting 13 homolog C.
   
  
 0.618
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.