STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPLP00000026897IF rod domain-containing protein; Belongs to the intermediate filament family. (607 aa)    
Predicted Functional Partners:
GALNT6
Polypeptide N-acetylgalactosaminyltransferase.
     
 0.747
FAIM2
Fas apoptotic inhibitory molecule 2; Belongs to the BI1 family.
      
 0.622
ACTR5
Actin related protein 5; Belongs to the actin family.
    
 0.566
NFRKB
Nuclear factor related to kappaB binding protein.
    
 0.548
MCRS1
Microspherule protein 1.
    
 0.537
INO80
INO80 complex ATPase subunit.
    
 0.534
INO80D
INO80 complex subunit D.
    
 0.527
INO80C
INO80 complex subunit C.
    
 0.525
ACTR8
Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily.
    
 0.519
RUVBL1
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
    
 0.494
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.