STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TLX1T cell leukemia homeobox 1. (279 aa)    
Predicted Functional Partners:
C8A
Complement C8 alpha chain.
      
 0.716
PAX2
Paired box 2.
      
 0.660
C1QL3
Complement C1q like 3.
     
 0.632
OSR1
Odd-skipped related transcription factor 1.
    
 0.482
PRDM13
PR/SET domain 13.
    
 0.480
SIX1
SIX homeobox 1.
      
 0.478
SIX2
SIX homeobox 2.
      
 0.478
TMEM182
Transmembrane protein 182.
   
  
 0.471
CKMT2
Creatine kinase, mitochondrial 2; Belongs to the ATP:guanido phosphotransferase family.
      
 0.457
GDF11
Growth differentiation factor 11.
      
 0.431
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.