STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPLP00000026997Uncharacterized protein; Belongs to the histone H2B family. (145 aa)    
Predicted Functional Partners:
ENSAPLP00000028245
Uncharacterized protein.
  
 0.928
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.865
ENSAPLP00000020328
Uncharacterized protein; Belongs to the histone H2A family.
  
 0.809
ENSAPLP00000021857
Histone H2A; Belongs to the histone H2A family.
  
 0.809
U3I3E5_ANAPP
Histone H2A; Belongs to the histone H2A family.
  
 0.808
ENSAPLP00000019251
annotation not available
  
 0.808
U3I3A9_ANAPP
Histone H2A; Belongs to the histone H2A family.
  
 0.806
U3I368_ANAPP
Histone H2A; Belongs to the histone H2A family.
  
 0.804
U3IUD0_ANAPP
JmjC domain-containing protein.
    
 0.795
ENSAPLP00000021740
TPR_REGION domain-containing protein.
    
 0.795
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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