STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COBLCordon-bleu WH2 repeat protein. (1450 aa)    
Predicted Functional Partners:
AKAP12
A-kinase anchoring protein 12.
  
  
 0.769
CHPT1
Choline phosphotransferase 1; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
      
 0.749
VILL
Villin like.
      
 0.716
JMY
Junction mediating and regulatory protein, p53 cofactor.
    
 0.635
PRR7
Proline rich 7, synaptic.
      
 0.621
ZFYVE28
Zinc finger FYVE-type containing 28.
      
 0.611
PFN4
Profilin; Belongs to the profilin family.
    
 
 0.603
FMN1
Formin 1.
     
 0.597
PRR16
Proline rich 16.
      
 0.586
PFN2
Profilin; Belongs to the profilin family.
    
 
 0.586
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.