STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRRFIP1LRR binding FLII interacting protein 1. (1007 aa)    
Predicted Functional Partners:
FLII
FLII actin remodeling protein.
    
 
 0.771
DHX36
DEAH-box helicase 36.
      
 0.719
DDX41
DEAD-box helicase 41.
      
 0.669
RAB17
RAB17, member RAS oncogene family.
      
 0.611
ENSAPLP00000025112
Uncharacterized protein.
      
 0.610
ELFN1
Extracellular leucine rich repeat and fibronectin type III domain containing 1.
      
 0.553
UNCX
UNC homeobox.
      
 0.510
ENSAPLP00000020606
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
      
 0.477
UCHL1
Ubiquitin carboxyl-terminal hydrolase.
      
 0.458
LSM14A
LSM14A mRNA processing body assembly factor.
      
 0.454
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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