STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEUROD1Neurogenic differentiation factor. (359 aa)    
Predicted Functional Partners:
PAX6
Paired box 6.
   
 
 0.791
NKX2-2
Homeobox domain-containing protein.
   
 0.677
RFX6
Regulatory factor X6.
   
  
 0.656
MYT1L
Myelin transcription factor 1 like.
   
  
 0.650
U3IBM6_ANAPP
Uncharacterized protein.
   
 0.639
FOXN4
Forkhead box N4.
   
  
 0.628
ISL1
ISL LIM homeobox 1.
   
  
 0.625
ISL2
LIM zinc-binding domain-containing protein.
   
  
 0.625
ENSAPLP00000018416
POU domain protein.
   
  
 0.617
SOX1
SRY-box transcription factor 1.
   
 
 0.617
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.