STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NCDNNeurochondrin. (718 aa)    
Predicted Functional Partners:
YPEL1
Protein yippee-like; Belongs to the yippee family.
      
 0.610
PLEKHG5
Pleckstrin homology and RhoGEF domain containing G5.
      
 0.586
RILPL2
Rab interacting lysosomal protein like 2.
      
 0.558
ADARB1
Adenosine deaminase RNA specific B1.
      
 0.555
AAR2
AAR2 splicing factor.
    
 
 0.483
U3J728_ANAPP
MMS19_N domain-containing protein.
      
 0.441
AATK
Apoptosis associated tyrosine kinase.
   
  
 0.440
HOMER3
WH1 domain-containing protein.
    
 
 0.437
RGS8
Regulator of G protein signaling 8.
      
 0.435
GEMIN2
Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family.
      
 0.430
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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